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Structure and function of virion RNA polymerase of a crAss-like …
https://www.nature.com/articles/s41586-020-2921-5
WEBNov 18, 2020 · One of the DPBB domains carries the universally conserved amino acid motif DFDGD, in which the three aspartates coordinate the Mg 2+ ions that are required for catalysis 9.
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PepYLCIV and PepYLCAV resistance gene Pepy-2 encodes DFDGD …
https://link.springer.com/article/10.1007/s00122-022-04125-9
WEBJun 2, 2022 · Our present study showed that the PepYLCIV and PepYLCAV resistance gene of PG1-1 encodes CaRDR3a, which also has a DFDGD motif and showed high sequence similarity with the amino acid sequences of RDRγ from tomato (Ty-1 and Ty-3), potato, and tobacco (Figs. 4b and 5).
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PepYLCIV and PepYLCAV resistance gene Pepy-2 encodes DFDGD …
https://pubmed.ncbi.nlm.nih.gov/35652932/
WEBPMID: 35652932. DOI: 10.1007/s00122-022-04125-9. Abstract. A begomovirus resistance gene Pepy-2 encoding the DFDGD-Class RNA-dependent RNA polymerase 3a was identified in pepper (C. annuum) through the forward and reverse genetic analyses.
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Overview of plant RNA dependent RNA polymerases in antiviral …
https://link.springer.com/article/10.1007/s40502-017-0339-3
WEBDec 22, 2017 · Recently it was found that tomato allelic Ty-1 and Ty-3 genes code for RDR, belong to RDRγ clade and contain an atypical DFDGD motif. Moreover, Ty-1 is the first geminivirus resistant gene to be identified in tomato (Verlaan et al. 2013). We will focus on plant RDRs from now onwards.
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Global Analysis of RNA-Dependent RNA Polymerase-Dependent …
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167712/
WEBApr 27, 2021 · RDR1, RDR2, and RDR6 make up the RDRα clade that shares the C-terminal canonical DLDGD amino acid motif, while the RDRγ clade consists of RDR3–5 that have an atypical DFDGD motif . Plant RDR proteins are involved in various processes, including pathogen defense, development, and abiotic stress responses [ 8 ].
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RNA Interference: A Natural Immune System of Plants to …
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6356646/
WEBJan 10, 2019 · Ty-1 and Ty-3 are resistance allele of wild-type tomato against the TYLCV virus, these alleles encode the DFDGD motif and belong to the RDRγ clade [145,146]. It is believed that various Ty genes are involved in RNA silencing and viral genomes cytosine methylation [145,147,148].
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The Functions of RNA-Dependent RNA Polymerases in Arabidopsis
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268507/
WEBJul 31, 2011 · RDR3, 4, and 5 share an atypical DFDGD amino acid motif in the catalytic domain. These three proteins have not been assigned functions to date. The better-studied Arabidopsis RDR proteins are RDR1, 2, and 6, whom all share the C-terminal canonical catalytic DLDGD motif of eukaryotic RDRs and have direct orthologs in many plant species.
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Nomenclature and functions of RNA-directed RNA polymerases
https://www.sciencedirect.com/science/article/pii/S136013850600029X
WEBMar 1, 2006 · NK (contains a DFDGD instead of the DLDGD signature) AtRDR3b: At2g19920: AtRDR5 (genomic DNA) Arabidopsis thaliana: NK (contains a DFDGD instead of the DLDGD signature) AtRDR3c: At2g19930: RdRP-like (cDNA) Oryza sativa: NK (contains a DFDGD instead of the DLDGD signature) OsRDR3a: NM_188258: RdRP …
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(PDF) Overview of plant RNA dependent RNA polymerases in antiviral
https://www.researchgate.net/publication/322006360_Overview_of_plant_RNA_dependent_RNA_polymerases_in_antiviral_defense_and_gene_silencing
WEBDec 22, 2017 · contain an atypical DFDGD motif. Moreover, Ty-1 is the. first geminivirus resistant gene to be identified in tomato (Verlaan et al. 2013). We will focus on plant RDRs from. now onwards.
DA: 42 PA: 99 MOZ Rank: 92
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The Tomato Yellow Leaf Curl Virus Resistance Genes
https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1003399
WEBMar 28, 2013 · The Tomato Yellow Leaf Curl Virus Resistance Genes Ty-1 and Ty-3 Are Allelic and Code for DFDGD-Class RNA–Dependent RNA Polymerases | PLOS Genetics. Open Access. Peer-reviewed. Research Article. The Tomato Yellow Leaf Curl Virus Resistance Genes Ty-1 and Ty-3 Are Allelic and Code for DFDGD-Class …
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